3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAGGAUUCAACCC*GGGCGCAUUUCCAC
Length
27 nucleotides
Bulged bases
3J74|1|5|A|686
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|5|G|462
3J74|1|5|A|463
3J74|1|5|G|464
3J74|1|5|G|465
3J74|1|5|A|466
3J74|1|5|U|467
3J74|1|5|U|468
3J74|1|5|C|469
3J74|1|5|A|470
3J74|1|5|A|471
3J74|1|5|C|472
3J74|1|5|C|473
3J74|1|5|C|474
*
3J74|1|5|G|680
3J74|1|5|G|681
3J74|1|5|G|682
3J74|1|5|C|683
3J74|1|5|G|684
3J74|1|5|C|685
3J74|1|5|A|686
3J74|1|5|U|687
3J74|1|5|U|688
3J74|1|5|U|689
3J74|1|5|C|690
3J74|1|5|C|691
3J74|1|5|A|692
3J74|1|5|C|693

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain E
Ribosomal protein eL6
Chain r
Ribosomal protein eL28

Coloring options:

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