3D structure

PDB id
3J74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGG*CAC
Length
36 nucleotides
Bulged bases
3J74|1|5|A|1983, 3J74|1|5|A|1991, 3J74|1|5|U|1992
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J74|1|5|G|1969
3J74|1|5|A|1970
3J74|1|5|C|1971
3J74|1|5|G|1972
3J74|1|5|G|1973
3J74|1|5|U|1974
3J74|1|5|G|1975
3J74|1|5|G|1976
3J74|1|5|C|1977
3J74|1|5|C|1978
3J74|1|5|A|1979
3J74|1|5|U|1980
3J74|1|5|G|1981
3J74|1|5|G|1982
3J74|1|5|A|1983
3J74|1|5|A|1984
3J74|1|5|G|1985
3J74|1|5|U|1986
3J74|1|5|C|1987
3J74|1|5|G|1988
3J74|1|5|G|1989
3J74|1|5|A|1990
3J74|1|5|A|1991
3J74|1|5|U|1992
3J74|1|5|C|1993
3J74|1|5|C|1994
3J74|1|5|G|1995
3J74|1|5|C|1996
3J74|1|5|U|1997
3J74|1|5|A|1998
3J74|1|5|A|1999
3J74|1|5|G|2000
3J74|1|5|G|2001
*
3J74|1|5|C|2016
3J74|1|5|A|2017
3J74|1|5|C|2018

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain 4
Eukaryotic elongation factor 2
Chain I
Ribosomal protein uL16
Chain K
Ribosomal protein uL11
Chain q
Ribosomal protein uL10

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.4537 s