IL_3J74_221
3D structure
- PDB id
- 3J74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUAAUUUGACUCAACACGGGAAACCUCAC*GGCUG
- Length
- 35 nucleotides
- Bulged bases
- 3J74|1|S2|A|1253, 3J74|1|S2|C|1254, 3J74|1|S2|G|1256, 3J74|1|S2|A|1258, 3J74|1|S2|A|1260, 3J74|1|S2|U|1519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J74|1|S2|C|1237
3J74|1|S2|U|1238
3J74|1|S2|U|1239
3J74|1|S2|A|1240
3J74|1|S2|A|1241
3J74|1|S2|U|1242
3J74|1|S2|U|1243
3J74|1|S2|U|1244
3J74|1|S2|G|1245
3J74|1|S2|A|1246
3J74|1|S2|C|1247
3J74|1|S2|U|1248
3J74|1|S2|C|1249
3J74|1|S2|A|1250
3J74|1|S2|A|1251
3J74|1|S2|C|1252
3J74|1|S2|A|1253
3J74|1|S2|C|1254
3J74|1|S2|G|1255
3J74|1|S2|G|1256
3J74|1|S2|G|1257
3J74|1|S2|A|1258
3J74|1|S2|A|1259
3J74|1|S2|A|1260
3J74|1|S2|C|1261
3J74|1|S2|C|1262
3J74|1|S2|U|1263
3J74|1|S2|C|1264
3J74|1|S2|A|1265
3J74|1|S2|C|1266
*
3J74|1|S2|G|1516
3J74|1|S2|G|1517
3J74|1|S2|C|1518
3J74|1|S2|U|1519
3J74|1|S2|G|1520
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SP
- Ribosomal protein uS19
- Chain SQ
- Ribosomal protein uS9
- Chain SS
- Ribosomal protein uS13
- Chain SU
- Ribosomal protein uS10
- Chain Sd
- Ribosomal protein uS14
- Chain Sf
- Ribosomal protein eS31
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