IL_3J77_080

3D structure

PDB id

3J77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

3J77|1|1S|A|1756

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J77|1|1S|C|1644
3J77|1|1S|G|1645
3J77|1|1S|C|1646
3J77|1|1S|U|1647
*
3J77|1|1S|A|1753
3J77|1|1S|A|1754
3J77|1|1S|A|1755
3J77|1|1S|A|1756
3J77|1|1S|G|1757

Current chains

Chain 1S

18S ribosomal RNA

Nearby chains

Chain 23

40S ribosomal protein S23

Chain 2S

Large subunit ribosomal RNA; LSU rRNA

Chain 30

40S ribosomal protein S30

Chain 91

60S ribosomal protein L41

Chain MR

messenger RNA