IL_3J77_090
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AAAUC*GUUU
- Length
- 9 nucleotides
- Bulged bases
- 3J77|1|2S|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_090 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.2697
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
3J77|1|2S|A|11
3J77|1|2S|A|12
3J77|1|2S|A|13
3J77|1|2S|U|14
3J77|1|2S|C|15
*
3J77|1|8S|G|144
3J77|1|8S|U|145
3J77|1|8S|U|146
3J77|1|8S|U|147
Current chains
- Chain 2S
- 25S ribosomal RNA
- Chain 8S
- 5.8S ribosomal RNA
Nearby chains
- Chain 65
- 60S ribosomal protein L15
- Chain 75
- 60S ribosomal protein L25
- Chain L8
- 60S ribosomal protein L8
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