IL_3J77_104
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- CAGACAUGGUGUUUUGUAUUUCACUGG*CAUAAUG
- Length
- 34 nucleotides
- Bulged bases
- 3J77|1|2S|U|447, 3J77|1|2S|U|448, 3J77|1|2S|G|450, 3J77|1|2S|A|486
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J77|1|2S|C|435
3J77|1|2S|A|436
3J77|1|2S|G|437
3J77|1|2S|A|438
3J77|1|2S|C|439
3J77|1|2S|A|440
3J77|1|2S|U|441
3J77|1|2S|G|442
3J77|1|2S|G|443
3J77|1|2S|U|444
3J77|1|2S|G|445
3J77|1|2S|U|446
3J77|1|2S|U|447
3J77|1|2S|U|448
3J77|1|2S|U|449
3J77|1|2S|G|450
3J77|1|2S|U|451
3J77|1|2S|A|486
3J77|1|2S|U|487
3J77|1|2S|U|488
3J77|1|2S|U|489
3J77|1|2S|C|490
3J77|1|2S|A|491
3J77|1|2S|C|492
3J77|1|2S|U|493
3J77|1|2S|G|494
3J77|1|2S|G|495
*
3J77|1|2S|C|618
3J77|1|2S|A|619
3J77|1|2S|U|620
3J77|1|2S|A|621
3J77|1|2S|A|622
3J77|1|2S|U|623
3J77|1|2S|G|624
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 67
- 60S ribosomal protein L17
- Chain 82
- 60S ribosomal protein L32
- Chain 83
- 60S ribosomal protein L33
- Chain L6
- 60S ribosomal protein L6
Coloring options: