IL_3J77_124
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 3J77|1|2S|G|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_124 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.2779
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
3J77|1|2S|A|983
3J77|1|2S|G|984
3J77|1|2S|U|985
*
3J77|1|2S|A|1099
3J77|1|2S|U|1100
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 68
- 60S ribosomal protein L18
- Chain 71
- 60S ribosomal protein L21
- Chain 79
- 60S ribosomal protein L29
- Chain L7
- 60S ribosomal protein L7
Coloring options: