IL_3J77_148
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- GUCAAC*GGAC
- Length
- 10 nucleotides
- Bulged bases
- 3J77|1|2S|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J77_148 not in the Motif Atlas
- Homologous match to IL_8C3A_066
- Geometric discrepancy: 0.2695
- The information below is about IL_8C3A_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
3J77|1|2S|G|1500
3J77|1|2S|U|1501
3J77|1|2S|C|1502
3J77|1|2S|A|1503
3J77|1|2S|A|1504
3J77|1|2S|C|1505
*
3J77|1|2S|G|1513
3J77|1|2S|G|1514
3J77|1|2S|A|1515
3J77|1|2S|C|1516
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 67
- 60S ribosomal protein L17
- Chain 69
- 60S ribosomal protein L19
- Chain 89
- 60S ribosomal protein L39
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