IL_3J77_183
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AGGGUGUAGAAUAAGU*ACUACCU
- Length
- 23 nucleotides
- Bulged bases
- 3J77|1|2S|U|2453, 3J77|1|2S|A|2458, 3J77|1|2S|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J77|1|2S|A|2449
3J77|1|2S|G|2450
3J77|1|2S|G|2451
3J77|1|2S|G|2452
3J77|1|2S|U|2453
3J77|1|2S|G|2454
3J77|1|2S|U|2455
3J77|1|2S|A|2456
3J77|1|2S|G|2457
3J77|1|2S|A|2458
3J77|1|2S|A|2459
3J77|1|2S|U|2460
3J77|1|2S|A|2461
3J77|1|2S|A|2462
3J77|1|2S|G|2463
3J77|1|2S|U|2464
*
3J77|1|2S|A|2491
3J77|1|2S|C|2492
3J77|1|2S|U|2493
3J77|1|2S|A|2494
3J77|1|2S|C|2495
3J77|1|2S|C|2496
3J77|1|2S|U|2497
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 25
- 40S ribosomal protein S25
- Chain L1
- 60S ribosomal protein L1
- Chain PT
- Transfer RNA; tRNA
- Chain S5
- 40S ribosomal protein S5
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