IL_3J77_222

3D structure

PDB id

3J77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

UUGUAAG*CUGAGA

Length

13 nucleotides

Bulged bases

3J77|1|2S|G|3369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J77|1|2S|U|3331
3J77|1|2S|U|3332
3J77|1|2S|G|3333
3J77|1|2S|U|3334
3J77|1|2S|A|3335
3J77|1|2S|A|3336
3J77|1|2S|G|3337
*
3J77|1|2S|C|3367
3J77|1|2S|U|3368
3J77|1|2S|G|3369
3J77|1|2S|A|3370
3J77|1|2S|G|3371
3J77|1|2S|A|3372

Current chains

Chain 2S

25S ribosomal RNA

Nearby chains

Chain 74

60S ribosomal protein L24

Chain 81

60S ribosomal protein L31

Chain L3

60S ribosomal protein L3