IL_3J77_242

3D structure

PDB id

3J77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.2 Å

Loop

Sequence

GGCCGGU*GAUUUCC

Length

14 nucleotides

Bulged bases

3J77|1|1S|G|655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J77|1|1S|G|651
3J77|1|1S|G|652
3J77|1|1S|C|653
3J77|1|1S|C|654
3J77|1|1S|G|655
3J77|1|1S|G|656
3J77|1|1S|U|657
*
3J77|1|1S|G|677
3J77|1|1S|A|678
3J77|1|1S|U|679
3J77|1|1S|U|680
3J77|1|1S|U|681
3J77|1|1S|C|682
3J77|1|1S|C|683

Current chains

Chain 1S

18S ribosomal RNA

Nearby chains

Chain S9

40S ribosomal protein S9