IL_3J77_261
3D structure
- PDB id
- 3J77 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.2 Å
Loop
- Sequence
- AGACAUAGA*UUUAUAGUUU
- Length
- 19 nucleotides
- Bulged bases
- 3J77|1|2S|U|2498, 3J77|1|2S|A|2500
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J77|1|2S|A|2441
3J77|1|2S|G|2442
3J77|1|2S|A|2443
3J77|1|2S|C|2444
3J77|1|2S|A|2445
3J77|1|2S|U|2446
3J77|1|2S|A|2447
3J77|1|2S|G|2448
3J77|1|2S|A|2449
*
3J77|1|2S|U|2497
3J77|1|2S|U|2498
3J77|1|2S|U|2499
3J77|1|2S|A|2500
3J77|1|2S|U|2501
3J77|1|2S|A|2502
3J77|1|2S|G|2503
3J77|1|2S|U|2504
3J77|1|2S|U|2505
3J77|1|2S|U|2506
Current chains
- Chain 2S
- 25S ribosomal RNA
Nearby chains
- Chain 1S
- Small subunit ribosomal RNA; SSU rRNA
- Chain 86
- 60S ribosomal protein L36
- Chain L1
- 60S ribosomal protein L1
- Chain S1
- 40S ribosomal protein S1
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