IL_3J78_027
3D structure
- PDB id
- 3J78 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.3 Å
Loop
- Sequence
- GAUACA*UGUAAUU
- Length
- 13 nucleotides
- Bulged bases
- 3J78|1|1S|A|506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3J78|1|1S|G|480
3J78|1|1S|A|481
3J78|1|1S|U|482
3J78|1|1S|A|483
3J78|1|1S|C|484
3J78|1|1S|A|485
*
3J78|1|1S|U|502
3J78|1|1S|G|503
3J78|1|1S|U|504
3J78|1|1S|A|505
3J78|1|1S|A|506
3J78|1|1S|U|507
3J78|1|1S|U|508
Current chains
- Chain 1S
- 18S ribosomal RNA
Nearby chains
- Chain 30
- 40S ribosomal protein S30
- Chain S9
- 40S ribosomal protein S9
Coloring options: