IL_3J78_062

3D structure

PDB id

3J78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.3 Å

Loop

Sequence

ACAG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J78|1|1S|A|1234
3J78|1|1S|C|1235
3J78|1|1S|A|1236
3J78|1|1S|G|1237
*
3J78|1|1S|C|1248
3J78|1|1S|U|1249
3J78|1|1S|U|1250
3J78|1|1S|U|1251

Current chains

Chain 1S

18S ribosomal RNA

Nearby chains

Chain 15

40S ribosomal protein S15

Chain 29

40S ribosomal protein S29

Chain 31

40S ribosomal protein S31