IL_3J78_218

3D structure

PDB id

3J78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.3 Å

Loop

Sequence

CC*GUUG

Length

6 nucleotides

Bulged bases

3J78|1|2S|U|3354, 3J78|1|2S|U|3355

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J78|1|2S|C|3349
3J78|1|2S|C|3350
*
3J78|1|2S|G|3353
3J78|1|2S|U|3354
3J78|1|2S|U|3355
3J78|1|2S|G|3356

Current chains

Chain 2S

25S ribosomal RNA

Nearby chains

Chain 72

60S ribosomal protein L22

Chain S8

40S ribosomal protein S8