IL_3J79_024
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAUA*UUUUAC
- Length
- 11 nucleotides
- Bulged bases
- 3J79|1|A|U|779, 3J79|1|A|U|792
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37455.1
- Basepair signature
- cWW-L-R-R-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
3J79|1|A|G|758
3J79|1|A|U|759
3J79|1|A|A|760
3J79|1|A|U|761
3J79|1|A|A|762
*
3J79|1|A|U|777
3J79|1|A|U|778
3J79|1|A|U|779
3J79|1|A|U|792
3J79|1|A|A|793
3J79|1|A|C|794
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain F
- 60S ribosomal protein uL4
- Chain L
- 60S ribosomal protein eL13
- Chain O
- 60S ribosomal protein uL15
- Chain P
- 60S ribosomal protein eL15
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