IL_3J79_060
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUCAAC*GAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_85920.1
- Basepair signature
- cWW-L-tWH-cSH-L-cWS-cWW
- Number of instances in this motif group
- 3
Unit IDs
3J79|1|A|G|1649
3J79|1|A|U|1650
3J79|1|A|C|1651
3J79|1|A|A|1652
3J79|1|A|A|1653
3J79|1|A|C|1654
*
3J79|1|A|G|1662
3J79|1|A|A|1663
3J79|1|A|A|1664
3J79|1|A|C|1665
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain T
- 60S ribosomal protein eL19
- Chain W
- 60S ribosomal protein uL22
- Chain e
- 60S ribosomal protein eL39
Coloring options: