IL_3J79_113
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUGGUAC*GGAUUA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_72532.1
- Basepair signature
- cWW-cWW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3J79|1|A|U|3405
3J79|1|A|U|3406
3J79|1|A|G|3407
3J79|1|A|G|3408
3J79|1|A|U|3409
3J79|1|A|A|3410
3J79|1|A|C|3411
*
3J79|1|A|G|3416
3J79|1|A|G|3417
3J79|1|A|A|3418
3J79|1|A|U|3419
3J79|1|A|U|3420
3J79|1|A|A|3421
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein uL6
- Chain M
- 60S ribosomal protein uL14
- Chain f
- 60S ribosomal protein eL40
Coloring options: