IL_3J79_117
3D structure
- PDB id
- 3J79 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUAAU*AGAAAC
- Length
- 12 nucleotides
- Bulged bases
- 3J79|1|A|A|3515
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73029.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 12
Unit IDs
3J79|1|A|G|3486
3J79|1|A|A|3487
3J79|1|A|U|3488
3J79|1|A|A|3489
3J79|1|A|A|3490
3J79|1|A|U|3491
*
3J79|1|A|A|3512
3J79|1|A|G|3513
3J79|1|A|A|3514
3J79|1|A|A|3515
3J79|1|A|A|3516
3J79|1|A|C|3517
Current chains
- Chain A
- 28S ribosomal RNA
Nearby chains
- Chain H
- 60S ribosomal protein uL6
- Chain K
- 60S ribosomal protein uL13
- Chain f
- 60S ribosomal protein eL40
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