IL_3J7A_016
3D structure
- PDB id
- 3J7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUCAG*CUAUGACG
- Length
- 14 nucleotides
- Bulged bases
- 3J7A|1|A|U|319, 3J7A|1|A|U|357
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02471.1
- Basepair signature
- cWW-tSS-L-tSH-tSS-tHS-tHS-cWW
- Number of instances in this motif group
- 41
Unit IDs
3J7A|1|A|U|317
3J7A|1|A|A|318
3J7A|1|A|U|319
3J7A|1|A|C|320
3J7A|1|A|A|321
3J7A|1|A|G|322
*
3J7A|1|A|C|354
3J7A|1|A|U|355
3J7A|1|A|A|356
3J7A|1|A|U|357
3J7A|1|A|G|358
3J7A|1|A|A|359
3J7A|1|A|C|360
3J7A|1|A|G|361
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain L
- 40S ribosomal protein eS8
- Chain Q
- 40S ribosomal protein uS12
- Chain V
- 40S ribosomal protein uS17
Coloring options: