IL_3J7P_021

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUCCG*CGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_26469.1

Basepair signature

cWW-bif-L-bif-L-bif-cWW

Number of instances in this motif group

1

Unit IDs

3J7P|1|5|G|482
3J7P|1|5|G|483
3J7P|1|5|U|484
3J7P|1|5|C|485
3J7P|1|5|C|486
3J7P|1|5|G|487
*
3J7P|1|5|C|669
3J7P|1|5|G|670
3J7P|1|5|G|671
3J7P|1|5|C|672

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain r

Ribosomal protein eL28