IL_3J7P_030

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUGGG*CGC

Length

9 nucleotides

Bulged bases

3J7P|1|5|U|728, 3J7P|1|5|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00757.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

3J7P|1|5|G|726
3J7P|1|5|C|727
3J7P|1|5|U|728
3J7P|1|5|G|729
3J7P|1|5|G|730
3J7P|1|5|G|731
*
3J7P|1|5|C|938
3J7P|1|5|G|939
3J7P|1|5|C|940

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain F

Ribosomal protein uL30

Chain M

Ribosomal protein eL14

Chain S

Ribosomal protein eL20