IL_3J7P_035

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGGCUC*GAGUG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_73029.1

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

12

Unit IDs

3J7P|1|5|U|750
3J7P|1|5|G|751
3J7P|1|5|G|752
3J7P|1|5|C|753
3J7P|1|5|U|754
3J7P|1|5|C|755
*
3J7P|1|5|G|908
3J7P|1|5|A|909
3J7P|1|5|G|910
3J7P|1|5|U|911
3J7P|1|5|G|912

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain H

Ribosomal protein uL6

Chain M

Ribosomal protein eL14

Chain S

Ribosomal protein eL20