IL_3J7P_061

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGGUCUUGG*UCAACCU

Length

16 nucleotides

Bulged bases

3J7P|1|5|U|1754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05918.1

Basepair signature

cWW-cWW-L-R-R-L-cWW-L-R-cWW-cWW

Number of instances in this motif group

4

Unit IDs

3J7P|1|5|A|1751
3J7P|1|5|G|1752
3J7P|1|5|G|1753
3J7P|1|5|U|1754
3J7P|1|5|C|1755
3J7P|1|5|U|1756
3J7P|1|5|U|1757
3J7P|1|5|G|1758
3J7P|1|5|G|1759
*
3J7P|1|5|U|1773
3J7P|1|5|C|1774
3J7P|1|5|A|1775
3J7P|1|5|A|1776
3J7P|1|5|C|1777
3J7P|1|5|C|1778
3J7P|1|5|U|1779

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain D

Ribosomal protein uL18

Chain I

Ribosomal protein uL16