IL_3J7P_065

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAAG*CCAUA

Length

10 nucleotides

Bulged bases

3J7P|1|5|U|2070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95526.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

34

Unit IDs

3J7P|1|5|U|1905
3J7P|1|5|U|1906
3J7P|1|5|A|1907
3J7P|1|5|A|1908
3J7P|1|5|G|1909
*
3J7P|1|5|C|2067
3J7P|1|5|C|2068
3J7P|1|5|A|2069
3J7P|1|5|U|2070
3J7P|1|5|A|2071

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

Ribosomal protein uL30

Chain Q

Ribosomal protein eL18

Chain e

Ribosomal protein eL32

Chain f

Ribosomal protein eL33