IL_3J7P_069
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCUCAUCAG*CUGGAGCG
- Length
- 18 nucleotides
- Bulged bases
- 3J7P|1|5|U|1930, 3J7P|1|5|C|1931, 3J7P|1|5|G|2055, 3J7P|1|5|A|2057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69989.1
- Basepair signature
- cWW-L-R-R-R-R-L-L-L-L-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
3J7P|1|5|C|1924
3J7P|1|5|G|1925
3J7P|1|5|C|1926
3J7P|1|5|U|1927
3J7P|1|5|C|1928
3J7P|1|5|A|1929
3J7P|1|5|U|1930
3J7P|1|5|C|1931
3J7P|1|5|A|1932
3J7P|1|5|G|1933
*
3J7P|1|5|C|2053
3J7P|1|5|U|2054
3J7P|1|5|G|2055
3J7P|1|5|G|2056
3J7P|1|5|A|2057
3J7P|1|5|G|2058
3J7P|1|5|C|2059
3J7P|1|5|G|2060
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain H
- Ribosomal protein uL6
- Chain M
- Ribosomal protein eL14
- Chain O
- Ribosomal protein uL13
- Chain S
- Ribosomal protein eL20
- Chain m
- Ribosomal protein eL40
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