IL_3J7P_070
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GACCCCAGAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 3J7P|1|5|C|1935, 3J7P|1|5|G|1940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65157.1
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-R-L-L-L-L-tHH-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
3J7P|1|5|G|1933
3J7P|1|5|A|1934
3J7P|1|5|C|1935
3J7P|1|5|C|1936
3J7P|1|5|C|1937
3J7P|1|5|C|1938
3J7P|1|5|A|1939
3J7P|1|5|G|1940
3J7P|1|5|A|1941
3J7P|1|5|A|1942
3J7P|1|5|A|1943
3J7P|1|5|A|1944
*
3J7P|1|5|U|2038
3J7P|1|5|G|2039
3J7P|1|5|A|2040
3J7P|1|5|A|2041
3J7P|1|5|A|2042
3J7P|1|5|A|2043
3J7P|1|5|U|2044
3J7P|1|5|G|2045
3J7P|1|5|G|2046
3J7P|1|5|A|2047
3J7P|1|5|U|2048
3J7P|1|5|G|2049
3J7P|1|5|G|2050
3J7P|1|5|C|2051
3J7P|1|5|G|2052
3J7P|1|5|C|2053
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain B
- Ribosomal protein uL3
- Chain F
- Ribosomal protein uL30
- Chain I
- Ribosomal protein uL16
- Chain O
- Ribosomal protein uL13
- Chain f
- Ribosomal protein eL33
- Chain m
- Ribosomal protein eL40
Coloring options: