IL_3J7P_073

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

3J7P|1|5|G|1975

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96830.1

Basepair signature

cWW-L-R-R-cWW-cWW

Number of instances in this motif group

5

Unit IDs

3J7P|1|5|G|1973
3J7P|1|5|U|1974
3J7P|1|5|G|1975
3J7P|1|5|G|1976
3J7P|1|5|C|1977
*
3J7P|1|5|G|1989
3J7P|1|5|A|1990
3J7P|1|5|A|1991
3J7P|1|5|U|1992
3J7P|1|5|C|1993

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain I

Ribosomal protein uL16

Chain K

Ribosomal protein uL11

Chain q

Ribosomal protein uL10