IL_3J7P_080

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAGUAG*CGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_29698.1

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

21

Unit IDs

3J7P|1|5|G|2358
3J7P|1|5|U|2359
3J7P|1|5|A|2360
3J7P|1|5|G|2361
3J7P|1|5|U|2362
3J7P|1|5|A|2363
3J7P|1|5|G|2364
*
3J7P|1|5|C|3858
3J7P|1|5|G|3859
3J7P|1|5|A|3860
3J7P|1|5|A|3861
3J7P|1|5|A|3862
3J7P|1|5|C|3863

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

Ribosomal protein uL4

Chain P

Ribosomal protein uL22