IL_3J7P_082

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGAG*CGAAAG

Length

11 nucleotides

Bulged bases

3J7P|1|5|A|2512, 3J7P|1|5|A|2513

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_95526.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

34

Unit IDs

3J7P|1|5|C|2446
3J7P|1|5|U|2447
3J7P|1|5|G|2448
3J7P|1|5|A|2449
3J7P|1|5|G|2450
*
3J7P|1|5|C|2509
3J7P|1|5|G|2510
3J7P|1|5|A|2511
3J7P|1|5|A|2512
3J7P|1|5|A|2513
3J7P|1|5|G|2514

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain A

Ribosomal protein uL2

Chain g

Ribosomal protein eL34

Chain j

Ribosomal protein eL37

Chain l

Ribosomal protein eL39