IL_3J7P_101
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 3J7P|1|5|A|3663, 3J7P|1|5|U|3679, 3J7P|1|5|C|3683
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73044.1
- Basepair signature
- cWW-R-tSS-tWW-tWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
3J7P|1|5|C|3660
3J7P|1|5|G|3661
3J7P|1|5|A|3662
3J7P|1|5|A|3663
3J7P|1|5|G|3664
3J7P|1|5|G|3665
*
3J7P|1|5|U|3677
3J7P|1|5|G|3678
3J7P|1|5|U|3679
3J7P|1|5|U|3680
3J7P|1|5|G|3681
3J7P|1|5|A|3682
3J7P|1|5|C|3683
3J7P|1|5|G|3684
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain A
- Ribosomal protein uL2
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain p
- Ribosomal protein eL43
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