3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GCGA*UCU
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_30484.1
Basepair signature
cWW-cWW-L-cWW
Number of instances in this motif group
30

Unit IDs

3J7P|1|5|G|4095
3J7P|1|5|C|4096
3J7P|1|5|G|4097
3J7P|1|5|A|4098
*
3J7P|1|5|U|4111
3J7P|1|5|C|4112
3J7P|1|5|U|4113

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain A
Ribosomal protein uL2
Chain G
Ribosomal protein eL8
Chain SB
Ribosomal protein eS1
Chain g
Ribosomal protein eL34

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0667 s