IL_3J7P_139
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCCUCGGAUAGC*GUGCGGAGUGC
- Length
- 23 nucleotides
- Bulged bases
- 3J7P|1|5|C|4756, 3J7P|1|5|C|4757, 3J7P|1|5|U|4763, 3J7P|1|5|C|4871, 3J7P|1|5|A|4874, 3J7P|1|5|G|4877
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_21243.1
- Basepair signature
- cWW-L-R-R-R-R-L-L-cSS-L-cWH-bif-cWW
- Number of instances in this motif group
- 1
Unit IDs
3J7P|1|5|G|4755
3J7P|1|5|C|4756
3J7P|1|5|C|4757
3J7P|1|5|U|4758
3J7P|1|5|C|4759
3J7P|1|5|G|4760
3J7P|1|5|G|4761
3J7P|1|5|A|4762
3J7P|1|5|U|4763
3J7P|1|5|A|4764
3J7P|1|5|G|4765
3J7P|1|5|C|4766
*
3J7P|1|5|G|4868
3J7P|1|5|U|4869
3J7P|1|5|G|4870
3J7P|1|5|C|4871
3J7P|1|5|G|4872
3J7P|1|5|G|4873
3J7P|1|5|A|4874
3J7P|1|5|G|4875
3J7P|1|5|U|4876
3J7P|1|5|G|4877
3J7P|1|5|C|4878
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal protein eL6
- Chain H
- Ribosomal protein uL6
- Chain M
- Ribosomal protein eL14
- Chain O
- Ribosomal protein uL13
- Chain S
- Ribosomal protein eL20
Coloring options: