IL_3J7P_144

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGGGG*CCCUCG

Length

11 nucleotides

Bulged bases

3J7P|1|5|C|5054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18835.1

Basepair signature

cWW-L-R-tSH-tWH-tHW-L-R-cWW-cWW

Number of instances in this motif group

16

Unit IDs

3J7P|1|5|C|4996
3J7P|1|5|G|4997
3J7P|1|5|G|4998
3J7P|1|5|G|4999
3J7P|1|5|G|5000
*
3J7P|1|5|C|5050
3J7P|1|5|C|5051
3J7P|1|5|C|5052
3J7P|1|5|U|5053
3J7P|1|5|C|5054
3J7P|1|5|G|5055

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

Ribosomal protein uL3

Chain d

Ribosomal protein eL31