IL_3J7P_194

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGACCGC*GAGGCC

Length

13 nucleotides

Bulged bases

3J7P|1|S2|C|877

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54301.1

Basepair signature

cWW-cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

3J7P|1|S2|G|873
3J7P|1|S2|G|874
3J7P|1|S2|A|875
3J7P|1|S2|C|876
3J7P|1|S2|C|877
3J7P|1|S2|G|878
3J7P|1|S2|C|879
*
3J7P|1|S2|G|907
3J7P|1|S2|A|908
3J7P|1|S2|G|909
3J7P|1|S2|G|910
3J7P|1|S2|C|911
3J7P|1|S2|C|912

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain R

Ribosomal protein eL19

Chain SH

Ribosomal protein eS7

Chain SL

Ribosomal protein uS17