IL_3J7P_208

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACCA*UCCCU

Length

9 nucleotides

Bulged bases

3J7P|1|S2|C|1215, 3J7P|1|S2|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42675.1

Basepair signature

cWW-tWH-cSH-L-cWS-cWW

Number of instances in this motif group

38

Unit IDs

3J7P|1|S2|A|1214
3J7P|1|S2|C|1215
3J7P|1|S2|C|1216
3J7P|1|S2|A|1217
*
3J7P|1|S2|U|1681
3J7P|1|S2|C|1682
3J7P|1|S2|C|1683
3J7P|1|S2|C|1684
3J7P|1|S2|U|1685

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SF

Ribosomal protein uS7

Chain SQ

Ribosomal protein uS9

Chain Sc

Ribosomal protein eS28