IL_3J7P_219

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUUACGCG*CCCCCAAC

Length

16 nucleotides

Bulged bases

3J7P|1|S2|C|1437

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_99620.1

Basepair signature

cWW-L-R-R-R-L-L-L-cWW-L-R-cWW

Number of instances in this motif group

2

Unit IDs

3J7P|1|S2|G|1406
3J7P|1|S2|U|1407
3J7P|1|S2|U|1408
3J7P|1|S2|A|1409
3J7P|1|S2|C|1410
3J7P|1|S2|G|1411
3J7P|1|S2|C|1412
3J7P|1|S2|G|1413
*
3J7P|1|S2|C|1433
3J7P|1|S2|C|1434
3J7P|1|S2|C|1435
3J7P|1|S2|C|1436
3J7P|1|S2|C|1437
3J7P|1|S2|A|1438
3J7P|1|S2|A|1439
3J7P|1|S2|C|1440

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SQ

Ribosomal protein uS9

Chain ST

Ribosomal protein eS19

Chain SU

Ribosomal protein uS10