IL_3J7P_224

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_56233.1

Basepair signature

cWW-cWW-L-R-R-cSH-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

3J7P|1|S2|G|1604
3J7P|1|S2|G|1605
3J7P|1|S2|G|1606
3J7P|1|S2|A|1607
3J7P|1|S2|U|1608
3J7P|1|S2|C|1609
3J7P|1|S2|G|1610
*
3J7P|1|S2|C|1629
3J7P|1|S2|A|1630
3J7P|1|S2|U|1631
3J7P|1|S2|G|1632
3J7P|1|S2|A|1633
3J7P|1|S2|A|1634
3J7P|1|S2|C|1635

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SS

Ribosomal protein uS13

Chain ST

Ribosomal protein eS19