3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGAUUCAACCC*GGGCGCAUUUCC
Length
23 nucleotides
Bulged bases
3J7P|1|5|A|686
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|G|464
3J7P|1|5|G|465
3J7P|1|5|A|466
3J7P|1|5|U|467
3J7P|1|5|U|468
3J7P|1|5|C|469
3J7P|1|5|A|470
3J7P|1|5|A|471
3J7P|1|5|C|472
3J7P|1|5|C|473
3J7P|1|5|C|474
*
3J7P|1|5|G|680
3J7P|1|5|G|681
3J7P|1|5|G|682
3J7P|1|5|C|683
3J7P|1|5|G|684
3J7P|1|5|C|685
3J7P|1|5|A|686
3J7P|1|5|U|687
3J7P|1|5|U|688
3J7P|1|5|U|689
3J7P|1|5|C|690
3J7P|1|5|C|691

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain E
Ribosomal protein eL6
Chain r
Ribosomal protein eL28

Coloring options:

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