3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGGCUC*GUGAGCUGG
Length
15 nucleotides
Bulged bases
3J7P|1|5|G|4522, 3J7P|1|5|A|4523
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|C|4453
3J7P|1|5|G|4454
3J7P|1|5|G|4455
3J7P|1|5|C|4456
3J7P|1|5|U|4457
3J7P|1|5|C|4458
*
3J7P|1|5|G|4520
3J7P|1|5|U|4521
3J7P|1|5|G|4522
3J7P|1|5|A|4523
3J7P|1|5|G|4524
3J7P|1|5|C|4525
3J7P|1|5|U|4526
3J7P|1|5|G|4527
3J7P|1|5|G|4528

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain B
Ribosomal protein uL3
Chain V
Ribosomal protein uL14

Coloring options:

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