IL_3J7P_283
3D structure
- PDB id
- 3J7P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AAUA*UAAUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7P_283 not in the Motif Atlas
- Geometric match to IL_8C3A_473
- Geometric discrepancy: 0.3867
- The information below is about IL_8C3A_473
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
3J7P|1|S2|A|528
3J7P|1|S2|A|529
3J7P|1|S2|U|530
3J7P|1|S2|A|531
*
3J7P|1|S2|U|553
3J7P|1|S2|A|554
3J7P|1|S2|A|555
3J7P|1|S2|U|556
3J7P|1|S2|U|557
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SJ
- Ribosomal protein uS4
- Chain Se
- Ribosomal protein eS30
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