3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
ACAGGAC*GGCCCUGU
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|S2|A|531
3J7P|1|S2|C|532
3J7P|1|S2|A|533
3J7P|1|S2|G|534
3J7P|1|S2|G|535
3J7P|1|S2|A|536
3J7P|1|S2|C|537
*
3J7P|1|S2|G|546
3J7P|1|S2|G|547
3J7P|1|S2|C|548
3J7P|1|S2|C|549
3J7P|1|S2|C|550
3J7P|1|S2|U|551
3J7P|1|S2|G|552
3J7P|1|S2|U|553

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SJ
Ribosomal protein uS4
Chain Se
Ribosomal protein eS30

Coloring options:

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