IL_3J7P_285

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AG*CGCGGUAAUUCCAGCU

Length

18 nucleotides

Bulged bases

3J7P|1|S2|G|626, 3J7P|1|S2|U|627, 3J7P|1|S2|A|628, 3J7P|1|S2|U|630

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|S2|A|599
3J7P|1|S2|G|600
*
3J7P|1|S2|C|622
3J7P|1|S2|G|623
3J7P|1|S2|C|624
3J7P|1|S2|G|625
3J7P|1|S2|G|626
3J7P|1|S2|U|627
3J7P|1|S2|A|628
3J7P|1|S2|A|629
3J7P|1|S2|U|630
3J7P|1|S2|U|631
3J7P|1|S2|C|632
3J7P|1|S2|C|633
3J7P|1|S2|A|634
3J7P|1|S2|G|635
3J7P|1|S2|C|636
3J7P|1|S2|U|637

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SD

Ribosomal protein uS3

Chain SX

Ribosomal protein uS12

Chain Se

Ribosomal protein eS30