3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGAGUAUGGUU*AGCUGAAAC
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|S2|G|1168
3J7P|1|S2|G|1169
3J7P|1|S2|A|1170
3J7P|1|S2|G|1171
3J7P|1|S2|U|1172
3J7P|1|S2|A|1173
3J7P|1|S2|U|1174
3J7P|1|S2|G|1175
3J7P|1|S2|G|1176
3J7P|1|S2|U|1177
3J7P|1|S2|U|1178
*
3J7P|1|S2|A|1183
3J7P|1|S2|G|1184
3J7P|1|S2|C|1185
3J7P|1|S2|U|1186
3J7P|1|S2|G|1187
3J7P|1|S2|A|1188
3J7P|1|S2|A|1189
3J7P|1|S2|A|1190
3J7P|1|S2|C|1191

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain 5
Large subunit ribosomal RNA; LSU rRNA
Chain SX
Ribosomal protein uS12
Chain n
Ribosomal protein eL41
Chain p
Ribosomal protein eL43

Coloring options:

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