IL_3J7P_294

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UG*UGUCUGGUUAAUUCCGAUAA

Length

22 nucleotides

Bulged bases

3J7P|1|S2|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J7P|1|S2|U|1350
3J7P|1|S2|G|1351
*
3J7P|1|S2|U|1360
3J7P|1|S2|G|1361
3J7P|1|S2|U|1362
3J7P|1|S2|C|1363
3J7P|1|S2|U|1364
3J7P|1|S2|G|1365
3J7P|1|S2|G|1366
3J7P|1|S2|U|1367
3J7P|1|S2|U|1368
3J7P|1|S2|A|1369
3J7P|1|S2|A|1370
3J7P|1|S2|U|1371
3J7P|1|S2|U|1372
3J7P|1|S2|C|1373
3J7P|1|S2|C|1374
3J7P|1|S2|G|1375
3J7P|1|S2|A|1376
3J7P|1|S2|U|1377
3J7P|1|S2|A|1378
3J7P|1|S2|A|1379

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SA

Ribosomal protein uS2

Chain SC

Ribosomal protein uS5

Chain SR

Ribosomal protein eS17

Chain Sa

Ribosomal protein eS26