3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GGCCC*GAGCGCU
Length
12 nucleotides
Bulged bases
3J7P|1|S2|C|1783
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|S2|G|1748
3J7P|1|S2|G|1749
3J7P|1|S2|C|1750
3J7P|1|S2|C|1751
3J7P|1|S2|C|1752
*
3J7P|1|S2|G|1780
3J7P|1|S2|A|1781
3J7P|1|S2|G|1782
3J7P|1|S2|C|1783
3J7P|1|S2|G|1784
3J7P|1|S2|C|1785
3J7P|1|S2|U|1786

Current chains

Chain S2
18S ribosomal RNA

Nearby chains

Chain SG
Ribosomal protein eS6

Coloring options:

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