3D structure

PDB id
3J7P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the 80S mammalian ribosome bound to eEF2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAAGGUGGCUC*GAGUGUUACAGC
Length
23 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3J7P|1|5|G|745
3J7P|1|5|A|746
3J7P|1|5|A|747
3J7P|1|5|G|748
3J7P|1|5|G|749
3J7P|1|5|U|750
3J7P|1|5|G|751
3J7P|1|5|G|752
3J7P|1|5|C|753
3J7P|1|5|U|754
3J7P|1|5|C|755
*
3J7P|1|5|G|908
3J7P|1|5|A|909
3J7P|1|5|G|910
3J7P|1|5|U|911
3J7P|1|5|G|912
3J7P|1|5|U|913
3J7P|1|5|U|914
3J7P|1|5|A|915
3J7P|1|5|C|916
3J7P|1|5|A|917
3J7P|1|5|G|918
3J7P|1|5|C|919

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain H
Ribosomal protein uL6
Chain M
Ribosomal protein eL14
Chain S
Ribosomal protein eL20

Coloring options:

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