IL_3J7Q_066
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CGCCCGAU*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_066 not in the Motif Atlas
- Geometric match to IL_1R3E_002
- Geometric discrepancy: 0.178
- The information below is about IL_1R3E_002
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_84476.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
3J7Q|1|5|C|1911
3J7Q|1|5|G|1912
3J7Q|1|5|C|1913
3J7Q|1|5|C|1914
3J7Q|1|5|C|1915
3J7Q|1|5|G|1916
3J7Q|1|5|A|1917
3J7Q|1|5|U|1918
*
3J7Q|1|5|G|2064
3J7Q|1|5|G|2065
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain F
- Ribosomal protein uL30
- Chain O
- Ribosomal protein uL13
- Chain S
- Ribosomal protein eL20
- Chain f
- Ribosomal protein eL33
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