IL_3J7Q_122
3D structure
- PDB id
- 3J7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the idle mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7Q_122 not in the Motif Atlas
- Homologous match to IL_5TBW_106
- Geometric discrepancy: 0.1899
- The information below is about IL_5TBW_106
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_65585.1
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
3J7Q|1|5|C|4412
3J7Q|1|5|C|4413
3J7Q|1|5|A|4414
3J7Q|1|5|A|4415
3J7Q|1|5|G|4416
*
3J7Q|1|5|C|4426
3J7Q|1|5|G|4427
3J7Q|1|5|A|4428
3J7Q|1|5|C|4429
3J7Q|1|5|G|4430
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain I
- Ribosomal protein uL16
- Chain m
- Ribosomal protein eL40
Coloring options: