IL_3J7R_202
3D structure
- PDB id
- 3J7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the translating mammalian ribosome-Sec61 complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGCC*GAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3J7R_202 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3202
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
3J7R|1|S2|C|927
3J7R|1|S2|G|928
3J7R|1|S2|G|929
3J7R|1|S2|C|930
3J7R|1|S2|C|931
*
3J7R|1|S2|G|1010
3J7R|1|S2|A|1011
3J7R|1|S2|A|1012
3J7R|1|S2|U|1013
3J7R|1|S2|G|1014
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SB
- Ribosomal protein eS1
- Chain SN
- Ribosomal protein uS15
- Chain Sb
- Ribosomal protein eS27
Coloring options: